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2019 Novel Coronavirus (2019-nCoV) is a new RNA coronavirus that caused the viral respiratory disease in humans in Wuhan, China, begins at December 2019.
The first 2019-nCoV genome sequence was deposited at 2020/1/05, and updated twice now to the 3rd version:
GenBank:MN908947
RefSeq:NC_045512
Region:complete
Collection Date:Dec-2019
Locality:China
Pre version:MN908947.2
Pre version:MN908947.1
As of 2020/2/08, 48 genome sequences of 2019-nCoV (complete, gapped, or partial) have been deposited in the GenBank.
#GenBankGene RegionCollection DateLocality
1MN908947complete1-Dec-19China
2LC521925complete1-Jan-20Japan
3LR757995complete5-Jan-20China: Wuhan
4LR757996complete1-Jan-20China: Wuhan
5LR757997gapped31-Dec-19China: Wuhan
6LR757998complete26-Dec-19China: Wuhan
7MN938384complete10-Jan-20China: Shenzhen
8MN938385RdRP1-Jan-20China: Shenzhen
9MN938386RdRP1-Jan-20China: Shenzhen
10MN938387S1-Jan-20China: Shenzhen
11MN938388S1-Jan-20China: Shenzhen
12MN938389S1-Jan-20China: Shenzhen
13MN938390S1-Jan-20China: Shenzhen
14MN970003RdRP8-Jan-20Thailand
15MN970004RdRP13-Jan-20Thailand
16MN975262complete11-Jan-20China
17MN975263RdRP1-Jan-20China
18MN975264RdRP1-Jan-20China
19MN975265RdRP1-Jan-20China
20MN975266S1-Jan-20China
21MN975267S1-Jan-20China
22MN975268S1-Jan-20China
23MN985325complete19-Jan-20USA: WA
24MN988668complete2-Jan-20China
25MN988669complete2-Jan-20China
26MN988713complete21-Jan-20USA: IL
27MN994467complete23-Jan-20USA: CA
28MN994468complete22-Jan-20USA: CA
29MN996527complete30-Dec-19China: Wuhan
30MN996528complete30-Dec-19China: Wuhan
31MN996529complete30-Dec-19China: Wuhan
32MN996530complete30-Dec-19China: Wuhan
33MN996531complete30-Dec-19China: Wuhan
34MN997409complete22-Jan-20USA: AZ
35MT007544complete25-Jan-20Australia: Victoria
36MT008022M1-Jan-20Italy: Rome
37MT008023M1-Jan-20Italy: Rome
38MT008029complete23-Dec-19China: Wuhan
39MT019530complete30-Dec-19China: Wuhan
40MT019531complete30-Dec-19China: Wuhan
41MT019532complete30-Dec-19China: Wuhan
42MT019533complete1-Jan-20China: Wuhan
43MT020781gapped29-Jan-20Finland
44MT020780complete25-Jan-20USA: WA
45MT020781complete25-Jan-20USA: WA
46MT027062complete29-Jan-20USA: CA
47MT027063complete29-Jan-20USA: CA
48MT027064complete29-Jan-20USA: CA
The sequence lists were last updated Friday Feb 07 10:45 2020 EST, and are updated as additional sequences are released. The table content is available for download.
1. CDC: About 2019 Novel Coronavirus (2019-nCoV.https://www.cdc.gov/coronavirus/2019-ncov/about/index.html
2. NCBI GenBank.https://www.ncbi.nlm.nih.gov/genbank/2019-ncov-seqs/
3. Latest version of 2019-nCoV Genome Refseq.https://www.ncbi.nlm.nih.gov/nuccore/MN908947